HES5

Protein-coding gene in the species Homo sapiens
HES5
Identifiers
AliasesHES5, bHLHb38, hes family bHLH transcription factor 5
External IDsOMIM: 607348; MGI: 104876; HomoloGene: 7755; GeneCards: HES5; OMA:HES5 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)[1]
Chromosome 1 (human)
Genomic location for HES5
Genomic location for HES5
Band1p36.32Start2,528,745 bp[1]
End2,530,263 bp[1]
Gene location (Mouse)
Chromosome 4 (mouse)
Chr.Chromosome 4 (mouse)[2]
Chromosome 4 (mouse)
Genomic location for HES5
Genomic location for HES5
Band4 E2|4 86.01 cMStart155,045,380 bp[2]
End155,046,828 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • ganglionic eminence

  • nucleus accumbens

  • amygdala

  • hypothalamus

  • caudate nucleus

  • putamen

  • superior frontal gyrus

  • Brodmann area 9

  • hippocampus proper

  • skin of abdomen
Top expressed in
  • medial ganglionic eminence

  • somite

  • neural tube

  • substantia nigra

  • thin ascending limb of loop of Henle

  • supraoptic nucleus

  • olfactory bulb

  • motor neuron

  • fossa

  • suprachiasmatic nucleus
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • DNA binding
  • protein dimerization activity
  • transcription factor binding
  • chromatin binding
  • DNA-binding transcription repressor activity, RNA polymerase II-specific
  • double-stranded DNA binding
  • DNA-binding transcription factor activity, RNA polymerase II-specific
  • RNA polymerase II transcription regulatory region sequence-specific DNA binding
  • transcription corepressor activity
  • sequence-specific DNA binding
  • sequence-specific double-stranded DNA binding
Cellular component
  • nucleoplasm
  • nucleus
  • cellular component
Biological process
  • Notch signaling pathway
  • auditory receptor cell fate determination
  • establishment of epithelial cell polarity
  • cell differentiation
  • negative regulation of astrocyte differentiation
  • regulation of inner ear auditory receptor cell differentiation
  • regulation of transcription, DNA-templated
  • negative regulation of neuron differentiation
  • inner ear receptor cell stereocilium organization
  • comma-shaped body morphogenesis
  • metanephric nephron tubule morphogenesis
  • chondrocyte differentiation
  • central nervous system myelination
  • negative regulation of transcription by RNA polymerase II
  • cell maturation
  • negative regulation of forebrain neuron differentiation
  • transcription, DNA-templated
  • nervous system development
  • negative regulation of stem cell differentiation
  • neuronal stem cell population maintenance
  • positive regulation of transcription, DNA-templated
  • multicellular organism development
  • glial cell fate commitment
  • telencephalon development
  • brain development
  • inner ear auditory receptor cell differentiation
  • cell adhesion
  • astrocyte differentiation
  • cartilage development
  • forebrain radial glial cell differentiation
  • regulation of myelination
  • negative regulation of oligodendrocyte differentiation
  • S-shaped body morphogenesis
  • neural tube development
  • neuron differentiation
  • positive regulation of cell population proliferation
  • positive regulation of BMP signaling pathway
  • negative regulation of pro-B cell differentiation
  • regulation of cell differentiation
  • smoothened signaling pathway
  • oligodendrocyte development
  • camera-type eye development
  • specification of loop of Henle identity
  • regulation of epithelial cell proliferation
  • negative regulation of transcription, DNA-templated
  • negative regulation of inner ear receptor cell differentiation
  • regulation of neurogenesis
  • positive regulation of receptor signaling pathway via JAK-STAT
  • positive regulation of Notch signaling pathway
  • positive regulation of transcription by RNA polymerase II
  • positive regulation of smooth muscle cell proliferation
  • positive regulation of tyrosine phosphorylation of STAT protein
  • protein-containing complex assembly
  • somitogenesis
  • central nervous system development
  • anterior/posterior pattern specification
  • negative regulation of inner ear auditory receptor cell differentiation
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

388585

15208

Ensembl

ENSG00000273529
ENSG00000197921

ENSMUSG00000048001

UniProt

Q5TA89

P70120

RefSeq (mRNA)

NM_001010926

NM_010419
NM_001370755

RefSeq (protein)

NP_001010926

NP_034549
NP_001357684

Location (UCSC)Chr 1: 2.53 – 2.53 MbChr 4: 155.05 – 155.05 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Transcription factor HES-5 is a protein that in humans is encoded by the HES5 gene.[5][6]

HES5 regulates the development of the early brain by maintaining stem cell neural progenitors in the ventricular zone.[7][8] HES5 expression significantly higher in squamous cervical carcinoma than in CIN as well as higher in CIN than normal cervical epithelia.[9] Human HES5 gene binds to Notch receptor and expression of HES5 decreases during cartilage differentiation.[10]

References

  1. ^ a b c ENSG00000197921 GRCh38: Ensembl release 89: ENSG00000273529, ENSG00000197921 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000048001 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Takebayashi K, Akazawa C, Nakanishi S, Kageyama R (January 1995). "Structure and promoter analysis of the gene encoding the mouse helix-loop-helix factor HES-5. Identification of the neural precursor cell-specific promoter element". The Journal of Biological Chemistry. 270 (3): 1342–1349. doi:10.1074/jbc.270.3.1342. PMID 7836401.
  6. ^ "Entrez Gene: HES5 hairy and enhancer of split 5 (Drosophila)".
  7. ^ Ohtsuka T, Sakamoto M, Guillemot F, Kageyama R (August 2001). "Roles of the basic helix-loop-helix genes Hes1 and Hes5 in expansion of neural stem cells of the developing brain". The Journal of Biological Chemistry. 276 (32): 30467–30474. doi:10.1074/jbc.M102420200. PMID 11399758.
  8. ^ Hatakeyama J, Bessho Y, Katoh K, Ookawara S, Fujioka M, Guillemot F, Kageyama R (November 2004). "Hes genes regulate size, shape and histogenesis of the nervous system by control of the timing of neural stem cell differentiation". Development. 131 (22): 5539–5550. doi:10.1242/dev.01436. hdl:2433/144732. PMID 15496443.
  9. ^ Liu J, Ye F, Chen H, Lü W, Zhou C, Xie X (2007). "Expression of differentiation associated protein Hes1 and Hes5 in cervical squamous carcinoma and its precursors". International Journal of Gynecological Cancer. 17 (6): 1293–1299. doi:10.1111/j.1525-1438.2007.00930.x. PMID 17388915. S2CID 25609083.
  10. ^ Karlsson C, Jonsson M, Asp J, Brantsing C, Kageyama R, Lindahl A (March 2007). "Notch and HES5 are regulated during human cartilage differentiation". Cell and Tissue Research. 327 (3): 539–551. doi:10.1007/s00441-006-0307-0. PMID 17093926. S2CID 33749726.

Further reading

  • Gazit R, Krizhanovsky V, Ben-Arie N (February 2004). "Math1 controls cerebellar granule cell differentiation by regulating multiple components of the Notch signaling pathway". Development. 131 (4): 903–913. doi:10.1242/dev.00982. PMID 14757642. S2CID 44769279.
  • Nakatani T, Mizuhara E, Minaki Y, Sakamoto Y, Ono Y (April 2004). "Helt, a novel basic-helix-loop-helix transcriptional repressor expressed in the developing central nervous system". The Journal of Biological Chemistry. 279 (16): 16356–16367. doi:10.1074/jbc.M311740200. PMID 14764602.
  • Kamakura S, Oishi K, Yoshimatsu T, Nakafuku M, Masuyama N, Gotoh Y (June 2004). "Hes binding to STAT3 mediates crosstalk between Notch and JAK-STAT signalling". Nature Cell Biology. 6 (6): 547–554. doi:10.1038/ncb1138. PMID 15156153. S2CID 36887899.
  • Katoh M, Katoh M (August 2004). "Identification and characterization of human HES2, HES3, and HES5 genes in silico". International Journal of Oncology. 25 (2): 529–534. doi:10.3892/ijo.25.2.529. PMID 15254753.
  • Ohtsuka T, Imayoshi I, Shimojo H, Nishi E, Kageyama R, McConnell SK (January 2006). "Visualization of embryonic neural stem cells using Hes promoters in transgenic mice". Molecular and Cellular Neurosciences. 31 (1): 109–122. doi:10.1016/j.mcn.2005.09.006. PMID 16214363. S2CID 35470002.
  • Ong CT, Cheng HT, Chang LW, Ohtsuka T, Kageyama R, Stormo GD, Kopan R (February 2006). "Target selectivity of vertebrate notch proteins. Collaboration between discrete domains and CSL-binding site architecture determines activation probability". The Journal of Biological Chemistry. 281 (8): 5106–5119. doi:10.1074/jbc.M506108200. PMID 16365048.
  • Karlsson C, Brantsing C, Svensson T, Brisby H, Asp J, Tallheden T, Lindahl A (February 2007). "Differentiation of human mesenchymal stem cells and articular chondrocytes: analysis of chondrogenic potential and expression pattern of differentiation-related transcription factors". Journal of Orthopaedic Research. 25 (2): 152–163. doi:10.1002/jor.20287. PMID 17072841.
  • Karlsson C, Jonsson M, Asp J, Brantsing C, Kageyama R, Lindahl A (March 2007). "Notch and HES5 are regulated during human cartilage differentiation". Cell and Tissue Research. 327 (3): 539–551. doi:10.1007/s00441-006-0307-0. PMID 17093926. S2CID 33749726.

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

  • v
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  • e
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies


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