PARD3B

Protein-coding gene in the species Homo sapiens
PARD3B
Identifiers
AliasesPARD3B, ALS2CR19, PAR3B, PAR3L, PAR3LC, PAR3beta, Par3Lb, par-3 family cell polarity regulator beta
External IDsMGI: 1919301; HomoloGene: 35389; GeneCards: PARD3B; OMA:PARD3B - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for PARD3B
Genomic location for PARD3B
Band2q33.3Start204,545,475 bp[1]
End205,620,162 bp[1]
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)[2]
Chromosome 1 (mouse)
Genomic location for PARD3B
Genomic location for PARD3B
Band1|1 C2Start61,677,983 bp[2]
End62,681,443 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • sural nerve

  • ventricular zone

  • Achilles tendon

  • epithelium of colon

  • saphenous vein

  • tibial arteries

  • mucosa of ileum

  • testicle

  • gonad

  • skin of hip
Top expressed in
  • Rostral migratory stream

  • crypt of lieberkuhn of small intestine

  • internal carotid artery

  • external carotid artery

  • sciatic nerve

  • lumbar spinal ganglion

  • renal corpuscle

  • ciliary body

  • iris

  • intestinal villus
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
  • phosphatidylinositol binding
Cellular component
  • membrane
  • endomembrane system
  • bicellular tight junction
  • cell junction
  • nucleoplasm
  • nuclear body
  • protein-containing complex
  • cytoplasm
  • adherens junction
  • cell cortex
  • apical plasma membrane
  • apical junction complex
Biological process
  • cell division
  • cell cycle
  • microtubule cytoskeleton organization
  • cell adhesion
  • protein localization
  • establishment of cell polarity
  • establishment or maintenance of epithelial cell apical/basal polarity
  • establishment of centrosome localization
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

117583

72823

Ensembl

ENSG00000116117

ENSMUSG00000052062

UniProt

Q8TEW8

Q9CSB4

RefSeq (mRNA)

NM_001302769
NM_057177
NM_152526
NM_205863

NM_001081050

RefSeq (protein)

NP_001289698
NP_476518
NP_689739
NP_995585

NP_001074519

Location (UCSC)Chr 2: 204.55 – 205.62 MbChr 1: 61.68 – 62.68 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Partitioning defective 3 homolog B is a protein that in humans is encoded by the PARD3B gene.[5][6][7]


Interactions

PARD3B has been shown to interact with Mothers against decapentaplegic homolog 3.[8]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000116117 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000052062 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Hadano S, Hand CK, Osuga H, Yanagisawa Y, Otomo A, Devon RS, Miyamoto N, Showguchi-Miyata J, Okada Y, Singaraja R, Figlewicz DA, Kwiatkowski T, Hosler BA, Sagie T, Skaug J, Nasir J, Brown RH Jr, Scherer SW, Rouleau GA, Hayden MR, Ikeda JE (Oct 2001). "A gene encoding a putative GTPase regulator is mutated in familial amyotrophic lateral sclerosis 2". Nat Genet. 29 (2): 166–73. doi:10.1038/ng1001-166. PMID 11586298. S2CID 52828189.
  6. ^ Kohjima M, Noda Y, Takeya R, Saito N, Takeuchi K, Sumimoto H (Dec 2002). "PAR3beta, a novel homologue of the cell polarity protein PAR3, localizes to tight junctions". Biochem Biophys Res Commun. 299 (4): 641–6. doi:10.1016/S0006-291X(02)02698-0. PMID 12459187.
  7. ^ "Entrez Gene: PARD3B par-3 partitioning defective 3 homolog B (C. elegans)".
  8. ^ Warner DR, Pisano M Michele, Roberts Emily A, Greene Robert M (Mar 2003). "Identification of three novel Smad binding proteins involved in cell polarity". FEBS Lett. 539 (1–3). Netherlands: 167–73. doi:10.1016/S0014-5793(03)00155-8. ISSN 0014-5793. PMID 12650946. S2CID 7429554.

Further reading

  • Izaki T, Kamakura S, Kohjima M, Sumimoto H (2006). "Two forms of human Inscuteable-related protein that links Par3 to the Pins homologues LGN and AGS3". Biochem. Biophys. Res. Commun. 341 (4): 1001–6. doi:10.1016/j.bbrc.2006.01.050. PMID 16458856.
  • Benzinger A, Muster N, Koch HB, et al. (2005). "Targeted proteomic analysis of 14-3-3 sigma, a p53 effector commonly silenced in cancer". Mol. Cell. Proteomics. 4 (6): 785–95. doi:10.1074/mcp.M500021-MCP200. PMID 15778465.
  • Izaki T, Kamakura S, Kohjima M, Sumimoto H (2005). "Phosphorylation-dependent binding of 14-3-3 to Par3beta, a human Par3-related cell polarity protein". Biochem. Biophys. Res. Commun. 329 (1): 211–8. doi:10.1016/j.bbrc.2005.01.115. PMID 15721295.
  • Jin J, Smith FD, Stark C, et al. (2004). "Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization". Curr. Biol. 14 (16): 1436–50. Bibcode:2004CBio...14.1436J. doi:10.1016/j.cub.2004.07.051. PMID 15324660. S2CID 2371325.
  • Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
  • Warner DR, Pisano MM, Roberts EA, Greene RM (2003). "Identification of three novel Smad binding proteins involved in cell polarity". FEBS Lett. 539 (1–3): 167–73. doi:10.1016/S0014-5793(03)00155-8. PMID 12650946. S2CID 7429554.
  • Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
  • Gao L, Macara IG, Joberty G (2003). "Multiple splice variants of Par3 and of a novel related gene, Par3L, produce proteins with different binding properties". Gene. 294 (1–2): 99–107. doi:10.1016/S0378-1119(02)00681-9. PMID 12234671.
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  • 1wg6: Solution structure of PDZ domain in protein XP_110852
    1wg6: Solution structure of PDZ domain in protein XP_110852


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